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Handy resource for freshwater protists and micro-adventuring

There exists a wonderful book with an illustrated key to the more common protists you can find in freshwater: Free-Living Freshwater Protozoa by Paddy Patterson. However, as many good things in life, it is out of print and thus very expensive (though relatively cheap-ish in the above link at the time of writing this).

This article was published in Scientific American’s former blog network and reflects the views of the author, not necessarily those of Scientific American


There exists a wonderful book with an illustrated key to the more common protists you can find in freshwater: Free-Living Freshwater Protozoa by Paddy Patterson. However, as many good things in life, it is out of print and thus very expensive (though relatively cheap-ish in the above link at the time of writing this). However, it is an excellent guide to stuff you can find under the microscope, especially as an introduction. Pretty pictures are key to learning basic ID -- after all, no amateur birder uses text-based dichotomous keys. Actually, most of us modern biologists avoid dichotomous keys like the plague as well. Personally, I just Google random crap until something reasonable comes up. Or ask an expert. I'm lazy, don't do as I do!

Today, however, is our lucky day! Recently, I found that a kind soul has anonymously posted scans online -- which has since been converted to a searchable PDF and is hosted on my Google docs! Come check it out and download a copy. Happy microadventuring!

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While we're at it, let's oogle at a couple ciliates. These guys come from some fairly anoxic (low oxygen -- think 'stinky') silt in the intertidal. There are plenty of various weird critters, including small flagellates, some of which are rare -- and some of which seem to have never been documented before! But that should come later. For now, here's a cute scuticociliate, a scuttle-y little ciliate that can jump fairly impressive distances. And often has a "sail" of long cilia along its mouth. Not as easy to see in the case below, but the surface ciliature turned out kinda cool!

And here are its innards. The clear spot to the right is the macronucleus, and the blobs are probably storage granules of some sort.

In anoxic samples, you often get to see some amazing close relationships between protists and bacteria. Endosymbionts thrive inside the cells, and episymbionts huddle on the surface. The exact nature of these relationships needs in-depth study, but one can guess that usually some sort of chemical exchange happens, especially since your average eukaryote is more or less hopelessly addicted to oxygen. Here's an oddly-shaped flat ciliate (fun to watch, kinda like a flattened... paddle, I guess, without the handle?):

And here we have its surface. See the very fine rods arranged in semi-organised pattern? Those are episymbiotic bacteria! They live and multiply on the surface of the cell, and some eukaryotes even have structures that enable better attachment of their companions -- Streblomastix provides a stunning example.

And last but not least, just to have _something_ freshwater in here, here's a stichotrich (ciliate). They're always gorgeous and photogenic. This one's been nibbling on algae. I believe it's Tetmemena sp. -- the genus name is fun because it has a 'meme' in it.

I'll bring out some smaller weird critters in a later post. For now -- get yourselves to a microscope and see how many critters in that book you can find yourselves!

About Psi Wavefunction

I first encountered the wonders of the protist realm back in childhood, when a murky droplet of pond scum was revealed by the microscope to entail an alien world in its own right. It took another decade to discover there was a field and a community dedicated to these organisms, and I bade farewell to the study of more familiar big things. As a kid I was also fascinated by tales of exploration of the New World, as well as those of fantasy worlds. I was then sad that the age of surveying new landmasses on earth was over, and that human extraterrestrial adventures are unlikely to happen within our lifetimes. It seemed everything was discovered already. But that could hardly be further from the truth -- all that is necessary to begin one's own Age of Exploration is a new approach or perspective, and a healthy does of imagination. Since reality has conjured far more than the human mind alone ever could, science yields a way to write stories much wilder than fiction. All one needs to access the alien world of microbes around (and inside) them is a shift of scale by simple glass sphere.
I'm currently finishing up my undergraduate degree in Vancouver and in transition career-wise, hopefully to end up in graduate school soon. I was born in Russia (and speak the language) and spent most of my life in US and Canada. In addition to protists, I'm fascinated by evolution, including that of culture and languages, diversity and biology of cells and how they self-organise, linguistics and anthropology, particularly of the less talked-about cultures, sociology of science and plenty of totally random things that snag my attention.
Banner image was kindly post-processed and enhanced by my friend: an accomplished comic artist who goes by Achiru.

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