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The Ocelloid

The Ocelloid


Through the eye of a microbe
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  • Profile

    Psi Wavefunction Psi Wavefunction is a recent graduate of the University of British Columbia working as a researcher at Indiana University, Bloomington, and blogs about protists and evolution at The Ocelloid as well as at Skeptic Wonder. Follow on Twitter @Ocelloid.
  • Musings on size: do bacteria want to be bigger?

    We all know that eukaryotes are bigger than prokaryotes. On average. Mostly. Of course our pathetic attempts at generalisation are too often devastated in a counterattack by nature’s awesomest power: variation. There’s variation within species, making it a necessity to ultimately tie biology back to populations from time to time — but that’s a topic [...]

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    MolBiol Carnival #18!

    Welcome to the (ever so slightly late — sorry) 18th issue of the MolBio carnival! [insert some awful pun involving strains here] For those of us working with live cultures, it’s important to remember they have a pedigree, and ultimately come from somewhere outside the lab (after all, all life has a common ancestor somewhere…). [...]

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    A quick dive into the protist world (Part II): Plastids

    Epic plastid symbiosis diagram

    (Part I here) In the previous post of this series (way too long ago…), we went on a little diving adventure into the microscopic world with our ocelloid-bearing Nematodinium, starting off with giant kelp forests and gradually zooming into the critters living on the blade surfaces and wading deep into the molecular world of genomes [...]

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    Carnival of Evolution #42: Answers to life, the universe and everything

    Don’t panic — welcome to the forty-second Carnival of Evolution! Please bear with me and pretend it’s still Dec 1st — I had just recently emerged from a wormhole in time, caused by being in a protistologist’s heaven: Dalhousie University in Halifax, with about 30-40 dedicated protist geeks milling about. It was distracting and a [...]

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    The Lost Eukaryote: an introduction to cellular evolution

    The last common ancestor is not the same as the first common ancestor...!

    The most fundamental divide in the diversity of living creatures is arguably the one between prokaryotes (=bacteria*) and eukaryotes (the tiny island of cumbersomely complex cells that consists of protists. And a couple insignificant lineages that are hardly worth talking about). Much of the earth’s biota seems perfectly content with small, streamlined genomes and similarly [...]

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    The protists and I are back — bringing cells, evolution and fossils!

    A Paramecium cell with DNA in blue and prey E.coli bacteria in red and green.

    And we’re back! The protists have never actually left, but some of us have pursued them (or rather, employment related to them) all the way into the cornfields of Indiana*. Apologies for the disappearance: I think it’s more precise to say that I clumsily tumbled here in August (still a bit dazed), rather than having [...]

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    A quick dive into the protist world (Part I)

    Nematodinium - seeing eye dinoflagellate

    Let’s go on an introductory tour of the protist world – a micro-dive if you will – led by our ocelloid-bearing submersible: let’s take Nematodinium out for a ride today. A seeing eye dinoflagellate. In fact, a seeing eye dino armed with nematocysts, a microscopic analogue of harpoons – just in case we see something [...]

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    First things first: so what are protists anyway?

    Ocelloid 2

    Hello everyone, and welcome again to The Ocelloid! The intro post before was a little too formal and impersonal, I think, at least for my usual style anyway. So I’m going to overcompensate a little this time – mostly because I’m actually away at a large protistology conference as we speak (yay!), and between all [...]

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    Welcome to The Ocelloid!

    Glimpse of eukaryotic diversity: dominated by protists

    We humans are a storytelling species, enamored with our own fantasies and imagination. Throughout all times and places our many cultures have devised fascinating tales of adventures and origins, stretching the limits of our minds —  sometimes with the gentle assistance of a little ethnobotany. However, as elaborate and exquisite as our narratives may be, [...]

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