Lab Rat

Lab Rat

Exploring the life and times of bacteria

Fighting bacteria with weapons from fungi


In order to survive, organisms produce small molecules known as 'primary metabolites' which help it to grow, develop and reproduce. Examples include nucleic acid used to make DNA, amino acids to make proteins, and simple sugars. Once the organism is established it will often start to produce 'secondary metabolites'. Secondary metabolites are not vital for survival but have important ecological functions, for example fighting off invaders or increasing the likelihood of sexual reproduction.

Filamentous fungi can produce a wide variety of secondary metabolites with antifungal, antibacterial or even insecticidal properties. The variety and composition of these secondary metabolites varies between and even within species leading to a huge range of diverse substances.

Microscopic image of Penicillium sp. which produces penicillin as a secondary metabolite. Credit link below.

Interestingly many of these genes for secondary metabolites were acquired by the fungi through horizontal gene transfer - the process by which one organism shares DNA with another (as opposed to the more traditional vertical gene transfer by which parents pass DNA to their offspring). Horizontal gene transfer is very common in bacteria but thought to be rarer in organisms with a nucleus such as plants, animals and fungi.

The genes for many of the antibacterial agents often did not evolve in the fungi, but instead were transferred across from other bacteria. Genetic analysis of the genes for synthesising beta-lactam antibiotics showed strong similarity between bacterial and fungal versions, suggesting a common ancestor. This is impressive as within the fungi the genes have to adapt to an entire new system of expression and regulation compared with the bacteria.

Gene transfer between bacteria, archaea and eukaryotes (plants, animals and fungi). Both bacteria and archaea share lots of genes with each other, while eukaryotes only carry out vertical gene transfer while picking up the occasional gene from bacteria.

From a medical point of view these new antibiotics from fungi are invaluable and many have already been isolated and used to treat infections. Not only can they be used in their natural state, fungal-derived antibiotics can also be a starter for further chemical modification, creating new types of antibiotics in order to combat growing bacterial resistance. An example is Cephalosporin C - which has only mild antibiotic activity within the fungi. Following synthetic modification it was adapted to the antibiotic ceftobiprole which is currently being assessed against MRSA in clinical trials.


Reference 1: Kück U, Bloemendal S, Teichert I (2014) Putting Fungi to Work: Harvesting a Cornucopia of Drugs, Toxins, and Antibiotics. PLoS Pathog 10(3): e1003950. doi:10.1371/journal.ppat.1003950

Credit link for image 1

Credit link for image 2

The views expressed are those of the author and are not necessarily those of Scientific American.

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